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Locus Information
Basic Information  
Symbol Hoxa2
Name
Class/Family ANTP/Hox2
Type protein-coding
Organism Mouse
Location 6 B3; 6 26.29 cM
Synonyms HOX1.11; AI324701; Hox-1.11; MGC151482; MGC151484
Link out MGI(96174)  Gene(15399)  RefSeq(NM_010451)   
Comments  
 
Homeodomain
HD1: SRRLRTAYTN TQLLELEKEF HFNKYLCRPR RVEIAALLDL TERQVKVWFQ NRRMKHKRQT
 
Noncoding Regulator(s)
mmu-mir-3960 Function Sequence: GGCGGCGGAGGCGGGGG
Location: chromosome 2
Target Position in CDS of transcript ENSMUST00000014848: 330/1119,
indicating as '#':

+------------------------#---------------------------------------------------------+
target 5' G  G     CG        U 3'
           CU CCGCC  CCGCCGCC    
           GG GGCGG  GGCGGCGG    
miRNA  3'    G     A           5'

mfe: -37.8 kcal/mol  p-value: 0.536647
(mfe: minimum free energy. Only the most minimal one demonstrated here.)
Reference: Hu R. et al. 2011. J Biol Chem [PubMed:21324897]
Acknowledgement: Sequences Hybrid modified from result of RNAhybrid v2.1